head 1.2; access; symbols RELEASE_4_9_0:1.1 RELEASE_5_1_0:1.1 RELEASE_4_8_0:1.1 RELEASE_5_0_0:1.1 RELEASE_4_7_0:1.1 RELEASE_4_6_2:1.1 RELEASE_4_6_1:1.1 RELEASE_4_6_0:1.1 RELEASE_5_0_DP1:1.1 RELEASE_4_5_0:1.1 RELEASE_4_4_0:1.1; locks; strict; comment @# @; 1.2 date 2003.10.22.23.44.05; author kris; state Exp; branches; next 1.1; 1.1 date 2001.08.22.12.07.26; author wjv; state Exp; branches; next ; desc @@ 1.2 log @Respect CC and CFLAGS @ text @--- Makefile.orig Tue Jul 9 20:20:42 1996 +++ Makefile Wed Oct 22 16:43:02 2003 @@@@ -8,11 +8,10 @@@@ # just set the CC value to your compiler and make sure optimization # is turned on (it significantly affects the running time). # -CC=gcc -CFLAGS= -g -O2 -Wall -Wshadow +CC?=cc +CFLAGS?=-O -pipe - -all: grepseq fmtseq idxseq typeseq wcseq examples +all: grepseq fmtseq idxseq typeseq wcseq grepseq: grepseq.o seqio.o $(CC) $(CFLAGS) -o grepseq grepseq.o seqio.o @ 1.1 log @Add seqio 1.2.2, a set of C functions which can read/write biological sequence files. PR: 29922 Submitted by: Tony Maher @ text @d1 10 a10 5 --- Makefile.orig Tue Aug 21 12:50:44 2001 +++ Makefile Tue Aug 21 12:51:13 2001 @@@@ -12,7 +12,7 @@@@ CFLAGS= -g -O2 -Wall -Wshadow d12 1 @